C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma antigen family D, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179222 MAGED1 9606 + X:51803007-51902357 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326587 MAGED1-001 51893602-51902357 protein_coding
  ENST00000375695 MAGED1-003 51893639-51902354 protein_coding
  ENST00000375722 MAGED1-005 51893533-51902354 protein_coding
  ENST00000375772 MAGED1-002 51803007-51902354 protein_coding
  ENST00000470461 MAGED1-008 51893646-51895752 processed_transcript
  ENST00000473931 MAGED1-011 51898611-51902354 processed_transcript
  ENST00000482188 MAGED1-009 51894569-51895702 processed_transcript
  ENST00000482599 MAGED1-010 51895656-51896474 processed_transcript
  ENST00000485420 MAGED1-006 51893658-51902352 processed_transcript
  ENST00000494718 MAGED1-004 51893649-51902354 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326587ENST00000375722ENST00000375772ENST00000473931ENST00000482188ENST00000485420
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326587 13.835±0.00 7.785±0.00 0.694±0.00 32.929±18.05 16.329±12.42 5.336±0.00 3.758±1.70 19.551±13.50 11.071±8.46 32.988±0.00 4.518±2.72 76.739±0.59 98.173±25.32 47.934±0.00
ENST00000375722 N/A N/A N/A N/A N/A N/A 2.902±0.00 N/A N/A 1.815±0.00 N/A N/A N/A N/A
ENST00000375772 N/A N/A 2.197±0.00 15.437±10.06 N/A 2.842±0.00 6.709±5.77 8.413±0.00 5.529±4.82 N/A 4.413±0.00 28.258±26.37 N/A 10.106±0.00
ENST00000473931 N/A 11.482±0.00 N/A N/A 4.389±0.00 N/A N/A N/A 4.704±0.00 2.006±0.00 N/A 5.462±0.00 N/A N/A
ENST00000482188 N/A N/A N/A N/A N/A N/A N/A N/A 3.667±0.00 N/A N/A N/A N/A N/A
ENST00000485420 N/A N/A 0.720±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 ISS chromatin
GO:0003713 IEA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006915 TAS apoptotic process
GO:0032922 ISS circadian regulation of gene expression
GO:0042752 IEA regulation of circadian rhythm
GO:0042981 TAS regulation of apoptotic process
GO:0043065 TAS positive regulation of apoptotic process
GO:0043234 IDA protein complex
GO:0043406 IEA positive regulation of MAP kinase activity
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0050680 IDA negative regulation of epithelial cell proliferation
GO:0090190 IEA positive regulation of branching involved in ureteric bud morphogenesis
GO:0097190 TAS apoptotic signaling pathway
GO:2001235 IEA positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058212 ndnl2 necdin-like 2 protein_coding Danio_rerio
ENSMUSG00000025151 Maged1 melanoma antigen, family D, 1 protein_coding Mus_musculus

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