C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WSC domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179314 WSCD1 9606 + 17:5772234-6124427 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317744 WSCD1-201 6070614-6124425 protein_coding
  ENST00000539421 WSCD1-202 6071108-6121300 protein_coding
  ENST00000563763 WSCD1-012 5772234-5930696 processed_transcript
  ENST00000571494 WSCD1-002 6080744-6121301 nonsense_mediated_decay
  ENST00000571973 WSCD1-007 6077950-6080920 protein_coding
  ENST00000572764 WSCD1-010 6057807-6080649 processed_transcript
  ENST00000573619 WSCD1-011 5772926-6080792 protein_coding
  ENST00000573634 WSCD1-005 6069117-6120738 protein_coding
  ENST00000574232 WSCD1-004 6071108-6120710 protein_coding
  ENST00000574946 WSCD1-001 6069106-6124427 protein_coding
  ENST00000576083 WSCD1-006 6070424-6088104 protein_coding
  ENST00000576233 WSCD1-008 6080147-6080794 protein_coding
  ENST00000576947 WSCD1-009 6081882-6090361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317744ENST00000539421ENST00000571494ENST00000571973ENST00000573634ENST00000574232ENST00000574946
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317744 2.576±0.00 1.098±0.00 0.809±0.00 1.536±0.31 0.700±0.25 1.732±0.06 0.795±0.56 1.343±1.24 0.277±0.13 0.251±0.00 1.494±0.38 0.381±0.27 3.967±0.26 1.085±0.46
ENST00000539421 N/A N/A N/A N/A 0.773±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.932±0.00
ENST00000571494 3.401±0.00 1.479±0.00 N/A 2.291±0.56 N/A N/A 0.729±0.00 0.274±0.00 N/A N/A 0.912±0.00 0.258±0.04 2.264±0.00 1.949±0.00
ENST00000571973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.991±0.00
ENST00000573634 N/A N/A N/A N/A N/A N/A N/A 0.331±0.00 0.205±0.00 N/A N/A N/A N/A N/A
ENST00000574232 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.661±0.00 N/A N/A N/A N/A
ENST00000574946 N/A N/A N/A 1.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N1 CIL_0000N1_0001 CGP 17:5499427-6124427
CIL_0000P5 CIL_0000P5_0001 CGP 17:5772234-6435199

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008146 IEA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060269 WSCD1 (1 of 3) WSC domain containing 1 protein_coding Danio_rerio
ENSDARG00000078006 WSCD1 (2 of 3) WSC domain containing 1 protein_coding Danio_rerio
ENSDARG00000091641 CABZ01007222.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000020811 Wscd1 WSC domain containing 1 protein_coding Mus_musculus

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