C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: teashirt zinc finger homeobox 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179981 TSHZ1 9606 + 18:75210755-75289950 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322038 TSHZ1-001 75210755-75289950 protein_coding
  ENST00000560661 TSHZ1-003 75244576-75285778 protein_coding
  ENST00000560918 TSHZ1-002 75221058-75286372 protein_coding
  ENST00000580243 TSHZ1-005 75211529-75288641 protein_coding
  ENST00000584217 TSHZ1-004 75282864-75289943 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322038ENST00000580243ENST00000584217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322038 14.127±0.00 2.066±0.00 1.202±0.00 2.675±1.03 0.941±0.02 3.195±0.00 1.210±0.39 1.369±0.70 2.153±0.00 2.831±0.68 1.155±0.32 3.672±2.56 3.787±0.92 2.096±0.75
ENST00000580243 7.853±0.00 N/A N/A N/A 1.606±0.00 N/A 1.057±0.00 N/A N/A 3.002±0.00 0.792±0.00 21.499±0.00 2.299±0.00 N/A
ENST00000584217 N/A N/A 0.588±0.00 N/A 0.323±0.00 0.510±0.00 N/A N/A N/A N/A N/A 0.447±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000995 CIL_000995_0001 VISTA 18:74724456-75325643
CIL_0007J6 CIL_0007J6_0002 UCNEbase 18:75128581-76219630

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009952 IEA anterior/posterior pattern specification
GO:0010468 IEA regulation of gene expression
GO:0042474 IEA middle ear morphogenesis
GO:0046872 IEA metal ion binding
GO:0060023 IEA soft palate development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005026 tshz1 teashirt family zinc finger 1 protein_coding Danio_rerio
ENSMUSG00000046982 Tshz1 teashirt zinc finger family member 1 protein_coding Mus_musculus

Loading