C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SMG1 pseudogene 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180747 SMG1P3 9606 - 16:21446683-21520444 transcribed_unprocessed_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000435197 SMG1P3-007 21502089-21520010 processed_transcript
  ENST00000437413 SMG1P3-006 21479545-21520179 processed_transcript
  ENST00000440195 SMG1P3-004 21447513-21456939 processed_transcript
  ENST00000520823 SMG1P3-003 21446683-21467160 processed_transcript
  ENST00000522480 SMG1P3-001 21447078-21501886 transcribed_unprocessed_pseudogene
  ENST00000522841 SMG1P3-002 21463205-21520444 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000435197ENST00000437413ENST00000520823ENST00000522841
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000435197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.747±0.00 N/A
ENST00000437413 N/A N/A 6.048±0.00 6.099±0.00 5.906±0.00 9.259±0.00 2.987±0.00 N/A 8.665±0.00 6.251±0.00 7.497±0.00 5.970±0.00 N/A N/A
ENST00000520823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 0.319±0.00 N/A N/A
ENST00000522841 0.321±0.00 0.679±0.00 2.234±0.00 0.759±0.41 1.626±1.34 1.695±1.51 0.388±0.25 0.633±0.45 1.551±1.48 2.069±1.52 0.821±0.43 0.669±0.65 0.148±0.05 0.772±0.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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