C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: basic helix-loop-helix family, member e22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180828 BHLHE22 9606 + 8:64580367-64583628 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321870 BHLHE22-001 64580367-64583628 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000321870
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000321870 0.073±0.00 0.723±0.00 6.102±0.00 0.433±0.23 1.200±0.00 0.064±0.00 0.197±0.00 0.494±0.40 0.226±0.09 0.062±0.02 0.161±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LP CIL_0005LP_0002 CGP 8:63168553-64583628
CIL_0007NS CIL_0007NS_0002 UCNEbase 8:63773910-64847207
CIL_0008AX CIL_0008AX_0001 VISTA 8:64284007-64885029
CIL_0008IQ CIL_0008IQ_0001 VISTA 8:64571742-65172902
CIL_00031Q CIL_00031Q_0001 CGP 8:64580367-64798761

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IEA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0021540 IEA corpus callosum morphogenesis
GO:0021796 IEA cerebral cortex regionalization
GO:0021952 IEA central nervous system projection neuron axonogenesis
GO:0021957 IEA corticospinal tract morphogenesis
GO:0021960 IEA anterior commissure morphogenesis
GO:0030182 IEA neuron differentiation
GO:0042803 IEA protein homodimerization activity
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity
GO:0060040 IEA retinal bipolar neuron differentiation
GO:0060042 IEA retina morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058039 bhlhe22 basic helix-loop-helix family, member e22 protein_coding Danio_rerio
ENSMUSG00000025128 Bhlhe22 basic helix-loop-helix family, member e22 protein_coding Mus_musculus

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