C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 2-oxoglutarate and iron-dependent oxygenase domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181396 OGFOD3 9606 - 17:82389223-82418637 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313056 OGFOD3-001 82389223-82418637 protein_coding
  ENST00000329197 OGFOD3-003 82392010-82418576 protein_coding
  ENST00000577495 OGFOD3-006 82398196-82418588 protein_coding
  ENST00000577606 OGFOD3-005 82406422-82418601 processed_transcript
  ENST00000578287 OGFOD3-011 82392215-82393217 processed_transcript
  ENST00000578586 OGFOD3-004 82390116-82393911 retained_intron
  ENST00000579407 OGFOD3-007 82392454-82411689 retained_intron
  ENST00000580445 OGFOD3-002 82392441-82418637 nonsense_mediated_decay
  ENST00000582146 OGFOD3-012 82391667-82392105 processed_transcript
  ENST00000582593 OGFOD3-010 82396597-82403967 protein_coding
  ENST00000583445 OGFOD3-009 82396545-82406432 protein_coding
  ENST00000583897 OGFOD3-008 82392226-82415516 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313056ENST00000329197ENST00000579407ENST00000580445
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313056 N/A 18.209±0.00 0.801±0.00 5.604±0.00 4.767±0.00 3.826±0.00 1.758±1.35 2.638±1.79 4.539±0.00 4.976±0.00 2.955±0.00 14.840±1.93 5.739±2.07 7.086±0.00
ENST00000329197 N/A N/A N/A 2.127±0.00 3.056±0.00 N/A 0.793±0.00 N/A 2.521±0.00 N/A 9.331±0.00 N/A 11.599±3.10 N/A
ENST00000579407 N/A N/A 3.871±0.00 N/A N/A N/A N/A 2.873±0.00 4.471±0.00 N/A 4.064±0.00 N/A 19.467±0.00 N/A
ENST00000580445 36.526±0.00 N/A N/A N/A 23.296±0.00 N/A N/A N/A N/A N/A N/A 4.148±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043U CIL_00043U_0002 CGP 17:82374230-82418637
CIL_00054N CIL_00054N_0001 CGP 17:82389223-82442645

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0031418 IEA L-ascorbic acid binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078481 OGFOD3 2-oxoglutarate and iron-dependent oxygenase domain containing 3 protein_coding Danio_rerio
ENSMUSG00000025169 Ogfod3 2-oxoglutarate and iron-dependent oxygenase domain containing 3 protein_coding Mus_musculus

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