C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fanconi anemia, complementation group B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181544 FANCB 9606 - X:14843407-14873069 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324138 FANCB-001 14843407-14873069 protein_coding
  ENST00000398334 FANCB-201 14843407-14873062 protein_coding
  ENST00000452869 FANCB-002 14843693-14873052 protein_coding
  ENST00000489126 FANCB-003 14865343-14869243 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000324138ENST00000398334ENST00000452869ENST00000489126
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000324138 N/A N/A N/A 0.117±0.00 N/A N/A N/A 0.071±0.00 N/A 0.110±0.00 N/A 0.028±0.00 N/A
ENST00000398334 N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A 0.154±0.00 N/A 0.362±0.00 0.162±0.00 0.072±0.00
ENST00000452869 0.096±0.00 0.026±0.00 0.036±0.00 0.017±0.00 0.160±0.03 0.108±0.00 0.054±0.01 0.113±0.00 0.124±0.00 0.137±0.02 0.180±0.09 N/A 0.118±0.01
ENST00000489126 N/A 0.246±0.00 N/A N/A N/A N/A 0.065±0.00 N/A 0.342±0.00 0.113±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002U1 CIL_0002U1_0002 CGP X:14529298-14873069
CIL_0002U0 CIL_0002U0_0002 CGP X:14843407-14922327

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006281 TAS DNA repair
GO:0043240 IDA Fanconi anaemia nuclear complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067596 fancb Fanconi anemia, complementation group B protein_coding Danio_rerio
ENSMUSG00000047757 Fancb Fanconi anemia, complementation group B protein_coding Mus_musculus

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