C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 3 open reading frame 58
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181744 C3orf58 9606 + 3:143971798-144048719 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315691 C3orf58-001 143971798-143992359 protein_coding
  ENST00000441925 C3orf58-003 143973608-143992367 protein_coding
  ENST00000483808 C3orf58-005 143972877-143986155 retained_intron
  ENST00000491798 C3orf58-004 143972655-143985562 processed_transcript
  ENST00000492452 C3orf58-006 143973090-143989769 protein_coding
  ENST00000493396 C3orf58-009 143972637-144048719 processed_transcript
  ENST00000495414 C3orf58-002 143973081-143990599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315691ENST00000441925ENST00000492452ENST00000495414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315691 5.338±0.00 1.553±0.00 0.611±0.00 3.132±0.38 4.482±0.48 3.431±2.53 0.985±0.79 2.857±1.39 2.703±0.65 3.261±0.66 1.373±0.00 2.232±1.53 4.835±2.60 2.684±1.70
ENST00000441925 N/A N/A N/A 0.577±0.00 N/A 2.166±0.00 0.232±0.00 1.703±0.00 0.948±0.24 2.682±0.00 0.199±0.00 2.647±2.54 2.096±0.81 2.436±1.99
ENST00000492452 N/A N/A 1.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.387±0.00 16.542±0.00 4.508±0.00
ENST00000495414 N/A N/A 0.208±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0005615 IDA extracellular space
GO:0014066 IDA regulation of phosphatidylinositol 3-kinase signaling
GO:0030126 IDA COPI vesicle coat
GO:0030137 IEA COPI-coated vesicle
GO:0060038 IDA cardiac muscle cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012816 C2H3orf58 (1 of 2) chromosome 3 open reading frame 58 protein_coding Danio_rerio
ENSDARG00000055629 C24H3orf58 (2 of 2) chromosome 3 open reading frame 58 protein_coding Danio_rerio
ENSMUSG00000045414 1190002N15Rik RIKEN cDNA 1190002N15 gene protein_coding Mus_musculus

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