C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MGAT4 family, member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182050 MGAT4C 9606 - 12:85955666-86838904 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000547225 MGAT4C-006 85979533-86256316 protein_coding
  ENST00000548651 MGAT4C-201 85978745-86049725 protein_coding
  ENST00000550365 MGAT4C-008 86011800-86256414 processed_transcript
  ENST00000551751 MGAT4C-009 86068091-86256323 processed_transcript
  ENST00000551921 MGAT4C-012 86049675-86838904 processed_transcript
  ENST00000552435 MGAT4C-007 85979736-86256380 protein_coding
  ENST00000552808 MGAT4C-004 85979013-86256305 protein_coding
  ENST00000602941 MGAT4C-010 86002352-86601304 processed_transcript
  ENST00000611864 MGAT4C-001 85955666-86049723 protein_coding
  ENST00000620241 MGAT4C-003 85978737-86256267 protein_coding
  ENST00000621808 MGAT4C-011 85978745-86838885 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000547225ENST00000548651ENST00000552435ENST00000552808ENST00000611864ENST00000620241ENST00000621808
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000547225 N/A N/A N/A N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A N/A N/A 1.382±0.00
ENST00000548651 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.399±0.00
ENST00000552435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.851±0.00 N/A N/A
ENST00000552808 N/A N/A N/A N/A N/A N/A 0.509±0.00 N/A N/A 0.032±0.00 0.050±0.00 N/A N/A N/A
ENST00000611864 0.005±0.00 0.035±0.00 0.009±0.00 0.154±0.00 0.018±0.00 0.044±0.01 0.084±0.01 0.024±0.00 0.012±0.00 0.014±0.00 0.004±0.00 0.018±0.01 0.014±0.00 N/A
ENST00000620241 N/A N/A N/A 0.588±0.00 N/A N/A 0.244±0.00 N/A N/A N/A N/A N/A N/A 1.550±0.82
ENST00000621808 N/A N/A N/A 1.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000214 CIL_000214_0002 CGP 12:85874295-86838904

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0008454 IEA alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041791 mgat4c mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) protein_coding Danio_rerio
ENSMUSG00000019888 Mgat4c MGAT4 family, member C protein_coding Mus_musculus

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