C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 259
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182087 TMEM259 9606 - 19:1009648-1021179 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333175 TMEM259-002 1009651-1021115 protein_coding
  ENST00000356663 TMEM259-001 1009648-1021179 protein_coding
  ENST00000586250 TMEM259-007 1012113-1014304 protein_coding
  ENST00000586285 TMEM259-014 1010695-1011992 protein_coding
  ENST00000586704 TMEM259-009 1009653-1020851 retained_intron
  ENST00000589055 TMEM259-013 1011866-1014247 retained_intron
  ENST00000589831 TMEM259-010 1012541-1013639 retained_intron
  ENST00000592052 TMEM259-011 1009720-1011356 retained_intron
  ENST00000592590 TMEM259-008 1009650-1017420 protein_coding
  ENST00000592618 TMEM259-012 1009652-1012289 retained_intron
  ENST00000593068 TMEM259-003 1009648-1013242 nonsense_mediated_decay
  ENST00000607316 TMEM259-005 1011852-1013342 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333175ENST00000356663ENST00000586285ENST00000586704ENST00000592052ENST00000592590ENST00000593068
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333175 N/A N/A 1.778±0.00 12.283±0.00 N/A 11.039±0.00 6.030±0.00 N/A 0.880±0.00 10.093±6.76 4.477±0.00 21.255±0.00 34.200±0.00 46.045±0.00
ENST00000356663 23.260±0.00 24.300±0.00 2.724±0.00 10.535±5.41 13.050±9.71 8.382±4.43 9.026±6.66 33.338±19.79 16.155±12.75 29.931±0.00 12.124±8.70 28.911±22.97 38.436±19.54 27.215±5.76
ENST00000586285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 51.907±0.00 N/A N/A
ENST00000586704 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.664±0.00 N/A N/A N/A N/A
ENST00000592052 N/A N/A N/A N/A 18.670±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.398±0.00 19.015±0.00
ENST00000593068 18.389±0.00 23.556±0.00 N/A N/A 14.910±0.00 10.767±0.00 N/A N/A N/A N/A N/A N/A N/A 24.834±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_0005ZM CIL_0005ZM_0002 CGP 19:984271-1009732
CIL_0005ZF CIL_0005ZF_0002 CGP 19:1000419-1021179
CIL_0000I1 CIL_0000I1_0001 CGP 19:1009648-1039068

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060442 tmem259 transmembrane protein 259 protein_coding Danio_rerio
ENSMUSG00000013858 Tmem259 transmembrane protein 259 protein_coding Mus_musculus

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