C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Kv channel interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182132 KCNIP1 9606 + 5:170353487-170736632 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328939 KCNIP1-001 170504036-170736632 protein_coding
  ENST00000377360 KCNIP1-005 170353487-170735935 protein_coding
  ENST00000390656 KCNIP1-201 170504036-170736630 protein_coding
  ENST00000411494 KCNIP1-004 170504573-170735806 protein_coding
  ENST00000434108 KCNIP1-003 170504573-170735806 protein_coding
  ENST00000517344 KCNIP1-007 170353689-170485970 nonsense_mediated_decay
  ENST00000518527 KCNIP1-006 170353487-170483157 processed_transcript
  ENST00000520740 KCNIP1-002 170504360-170736625 protein_coding
  ENST00000616807 KCNIP1-202 170712853-170736630 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000328939ENST00000377360ENST00000411494ENST00000434108ENST00000517344ENST00000518527ENST00000520740ENST00000616807
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000328939 N/A N/A N/A 4.289±2.82 0.039±0.00 N/A N/A 1.095±0.00 N/A 0.605±0.00 0.244±0.00 2.136±0.00
ENST00000377360 0.037±0.00 N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A N/A
ENST00000411494 N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A
ENST00000434108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.265±0.09 N/A
ENST00000517344 N/A N/A N/A N/A N/A N/A N/A N/A 0.552±0.00 0.182±0.00 N/A 0.785±0.00
ENST00000518527 0.128±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520740 N/A N/A N/A 0.676±0.00 0.006±0.00 N/A N/A N/A N/A 0.070±0.00 N/A 0.391±0.00
ENST00000616807 N/A 0.234±0.00 0.075±0.00 2.625±0.00 0.141±0.00 0.169±0.00 0.190±0.00 0.418±0.00 0.640±0.24 0.163±0.10 0.344±0.17 0.696±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023U CIL_00023U_0001 CGP 5:170353487-170736632

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IEA potassium channel activity
GO:0005509 IEA calcium ion binding
GO:0005513 TAS detection of calcium ion
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005886 IEA plasma membrane
GO:0007165 TAS:IEA signal transduction
GO:0007268 TAS synaptic transmission
GO:0015459 IEA potassium channel regulator activity
GO:0030425 IEA dendrite
GO:0034705 IEA potassium channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043025 IEA neuronal cell body
GO:0044325 IEA ion channel binding
GO:0045760 IEA positive regulation of action potential
GO:0046982 IEA protein heterodimerization activity
GO:0047485 IEA protein N-terminus binding
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022109 kcnip1a Kv channel interacting protein 1 a protein_coding Danio_rerio
ENSDARG00000034808 kcnip1b Kv channel interacting protein 1 b protein_coding Danio_rerio
ENSMUSG00000053519 Kcnip1 Kv channel-interacting protein 1 protein_coding Mus_musculus

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