C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and SOCS box containing 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182177 ASB18 9606 - 2:236194872-236264409 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000409749 ASB18-001 236194872-236264345 protein_coding
  ENST00000430053 ASB18-006 236214754-236264409 protein_coding
  ENST00000447030 ASB18-005 236196058-236214601 protein_coding
  ENST00000469508 ASB18-004 236250541-236254171 processed_transcript
  ENST00000487961 ASB18-003 236247329-236264360 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409749ENST00000430053ENST00000447030ENST00000469508ENST00000487961
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409749 N/A N/A N/A N/A N/A 1.128±0.00 N/A N/A N/A N/A N/A N/A 0.060±0.00
ENST00000430053 N/A N/A N/A N/A N/A 1.067±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000447030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.438±0.00
ENST00000469508 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.911±0.00 N/A N/A N/A
ENST00000487961 0.017±0.00 0.094±0.00 0.063±0.00 0.049±0.00 0.040±0.00 0.197±0.01 0.076±0.00 0.003±0.00 0.046±0.00 0.012±0.00 0.008±0.00 0.010±0.00 0.025±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RK CIL_0007RK_0001 VISTA 2:235753955-236356213
CIL_0008K4 CIL_0008K4_0001 VISTA 2:235862720-236463204
CIL_0007XN CIL_0007XN_0001 VISTA 2:235956423-236557500
CIL_0003RD CIL_0003RD_0001 CGP 2:236165236-236264409
CIL_0002YM CIL_0002YM_0001 CGP 2:236194872-236507542

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012948 asb18 ankyrin repeat and SOCS box containing 18 protein_coding Danio_rerio
ENSMUSG00000067081 Asb18 ankyrin repeat and SOCS box-containing 18 protein_coding Mus_musculus

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