C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182472 CAPN12 9606 - 19:38730187-38769904 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328867 CAPN12-001 38730559-38744474 protein_coding
  ENST00000593700 CAPN12-004 38730458-38735677 retained_intron
  ENST00000594497 CAPN12-008 38734566-38735662 retained_intron
  ENST00000594552 CAPN12-005 38730187-38735410 nonsense_mediated_decay
  ENST00000595177 CAPN12-010 38730678-38735422 protein_coding
  ENST00000597354 CAPN12-009 38731168-38735624 retained_intron
  ENST00000597716 CAPN12-003 38730534-38736991 retained_intron
  ENST00000597740 CAPN12-007 38742243-38744172 nonsense_mediated_decay
  ENST00000597987 CAPN12-011 38730274-38735405 protein_coding
  ENST00000598684 CAPN12-006 38741777-38744172 protein_coding
  ENST00000601685 CAPN12-012 38733121-38735672 retained_intron
  ENST00000601953 CAPN12-002 38730431-38769904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000594552
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000594552 71.578±0.00 36.880±0.00 88.721±0.00 75.767±0.00 19.689±0.00 125.003±0.00 29.856±0.00 202.454±0.00 18.778±0.00 43.583±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004198 IEA:IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005622 IEA intracellular
GO:0005737 IBA cytoplasm
GO:0006508 IEA:IBA proteolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010758 capn12 calpain 12 protein_coding Danio_rerio
ENSDARG00000055094 CAPN12 (2 of 2) calpain 12 protein_coding Danio_rerio
ENSMUSG00000054083 Capn12 calpain 12 protein_coding Mus_musculus

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