C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeobox B4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182742 HOXB4 9606 - 17:48575513-48580111 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332503 HOXB4-001 48575513-48580111 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000332503
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000332503 2.448±0.00 1.499±0.00 6.048±0.00 0.262±0.16 0.074±0.00 0.195±0.00 2.677±2.05 0.329±0.00 1.396±0.22 1.055±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0002011 IEA morphogenesis of an epithelial sheet
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008283 IEA cell proliferation
GO:0009952 IEA anterior/posterior pattern specification
GO:0030097 IEA hemopoiesis
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048103 IEA somatic stem cell division
GO:0048536 IEA spleen development
GO:0048539 IEA bone marrow development
GO:0048704 IEA embryonic skeletal system morphogenesis
GO:0048705 IEA skeletal system morphogenesis
GO:0060216 IEA definitive hemopoiesis
GO:0060218 IDA hematopoietic stem cell differentiation
GO:2000738 IDA positive regulation of stem cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013533 hoxb4a homeo box B4a protein_coding Danio_rerio
ENSMUSG00000038692 Hoxb4 homeobox B4 protein_coding Mus_musculus

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