C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypeptide N-acetylgalactosaminyltransferase 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182870 GALNT9 9606 - 12:132196372-132329349 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328957 GALNT9-009 132196509-132329203 protein_coding
  ENST00000397325 GALNT9-001 132196372-132206028 protein_coding
  ENST00000411988 GALNT9-006 132196509-132257742 protein_coding
  ENST00000424720 GALNT9-010 132247440-132329349 retained_intron
  ENST00000535208 GALNT9-008 132257851-132275218 processed_transcript
  ENST00000538356 GALNT9-004 132201137-132206159 protein_coding
  ENST00000540493 GALNT9-007 132283164-132286471 retained_intron
  ENST00000541995 GALNT9-002 132197073-132205792 protein_coding
  ENST00000542942 GALNT9-005 132203507-132205802 protein_coding
  ENST00000614360 GALNT9-011 132272693-132275224 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000328957ENST00000397325ENST00000424720ENST00000535208ENST00000538356ENST00000541995ENST00000542942ENST00000614360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000328957 N/A N/A N/A 7.545±3.52 N/A N/A N/A 1.023±0.00 N/A 0.738±0.54 0.156±0.00 0.250±0.00
ENST00000397325 N/A 0.101±0.00 N/A 3.165±0.00 0.055±0.00 N/A N/A 1.831±0.00 0.016±0.00 N/A N/A 0.125±0.00
ENST00000424720 N/A N/A N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A 0.145±0.08 0.044±0.00
ENST00000535208 N/A N/A N/A N/A N/A 0.535±0.00 N/A N/A N/A 0.410±0.00 N/A N/A
ENST00000538356 N/A 0.359±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541995 N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A
ENST00000542942 N/A N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000614360 0.025±0.00 0.090±0.00 0.088±0.00 N/A 0.029±0.00 0.043±0.00 0.056±0.00 0.476±0.00 0.181±0.00 0.069±0.00 N/A 0.061±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0004653 NAS polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0006493 NAS protein O-linked glycosylation
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030246 IEA carbohydrate binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006832 GALNT9 polypeptide N-acetylgalactosaminyltransferase 9 protein_coding Danio_rerio
ENSMUSG00000033316 Galnt9 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 protein_coding Mus_musculus

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