C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) A receptor, rho 3 (gene/pseudogene)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183185 GABRR3 9606 - 3:97986673-98035304 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000470589 GABRR3-001 97997443-98035304 retained_intron
  ENST00000472788 GABRR3-002 97986673-98034989 protein_coding
  ENST00000621172 GABRR3-201 97986683-98035304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartKidneyLiverMusclePlacentaTestisENST00000470589ENST00000472788ENST00000621172
Transcript ID Adrenal Brain Heart Kidney Liver Muscle Placenta Testis
ENST00000470589 0.013±0.00 0.002±0.00 0.022±0.00 0.065±0.06 0.024±0.02 0.010±0.00 N/A 0.019±0.00
ENST00000472788 N/A N/A N/A N/A N/A N/A N/A 0.071±0.04
ENST00000621172 N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004890 NAS GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005575 ND cellular_component
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0007214 NAS gamma-aminobutyric acid signaling pathway
GO:0007268 NAS synaptic transmission
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019904 IEA protein domain specific binding
GO:0030054 IEA cell junction
GO:0034220 TAS ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:0055085 TAS transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027153 gabrr3a gamma-aminobutyric acid (GABA) A receptor, rho 3a protein_coding Danio_rerio
ENSDARG00000030750 gabrr3b gamma-aminobutyric acid (GABA) A receptor, rho 3b protein_coding Danio_rerio
ENSMUSG00000074991 Gabrr3 gamma-aminobutyric acid (GABA) receptor, rho 3 protein_coding Mus_musculus

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