C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear pore complex interacting protein family, member A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183426 NPIPA1 9606 + 16:14750813-14952060 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328085 NPIPA1-001 14937443-14952056 protein_coding
  ENST00000424549 NPIPA1-006 14938215-14950080 protein_coding
  ENST00000472413 NPIPA1-002 14922802-14952060 processed_transcript
  ENST00000534720 NPIPA1-003 14941820-14950700 retained_intron
  ENST00000537062 NPIPA1-008 14945885-14950521 protein_coding
  ENST00000541836 NPIPA1-004 14927283-14951874 processed_transcript
  ENST00000545479 NPIPA1-007 14941519-14945873 retained_intron
  ENST00000545831 NPIPA1-005 14937414-14945923 processed_transcript
  ENST00000618714 NPIPA1-201 14750813-14950805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328085ENST00000472413ENST00000534720ENST00000541836
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.607±0.00 N/A N/A N/A
ENST00000472413 N/A N/A 0.472±0.00 N/A 0.397±0.00 0.466±0.08 0.069±0.00 0.192±0.00 N/A 0.311±0.00 0.274±0.00 1.186±1.01 0.431±0.09 N/A
ENST00000534720 2.031±0.00 7.737±0.00 1.347±0.00 2.312±0.84 3.480±1.05 1.681±0.44 0.440±0.18 1.661±0.61 1.106±0.62 1.664±0.41 0.905±0.19 2.515±0.96 0.694±0.13 8.955±5.70
ENST00000541836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.218±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005643 IEA nuclear pore
GO:0015031 IEA protein transport
GO:0051028 IEA mRNA transport

Homologs

No Homologs available.

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