C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pregnancy specific beta-1-glycoprotein 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183668 PSG9 9606 - 19:43211791-43269530 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000244293 PSG9-002 43257160-43269498 protein_coding
  ENST00000270077 PSG9-001 43253282-43269528 protein_coding
  ENST00000291752 PSG9-009 43253283-43269437 protein_coding
  ENST00000418820 PSG9-011 43211791-43269530 protein_coding
  ENST00000443718 PSG9-007 43253287-43269528 protein_coding
  ENST00000593948 PSG9-008 43253279-43269528 protein_coding
  ENST00000595404 PSG9-010 43211791-43260746 retained_intron
  ENST00000596730 PSG9-006 43257165-43269521 protein_coding
  ENST00000621109 PSG9-201 43211792-43269523 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLungOvaryPlacentaENST00000244293ENST00000270077ENST00000443718ENST00000593948ENST00000595404ENST00000596730
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta
ENST00000244293 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.205±0.00
ENST00000270077 N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 147.028±165.33
ENST00000443718 N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A 0.037±0.00 N/A
ENST00000593948 N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A 4.456±0.00
ENST00000595404 0.031±0.00 N/A 0.044±0.00 0.049±0.00 0.028±0.00 0.039±0.03 N/A N/A 0.016±0.00 N/A
ENST00000596730 0.024±0.00 0.031±0.00 0.173±0.00 N/A N/A N/A N/A 0.017±0.00 0.019±0.01 2.234±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UJ CIL_0003UJ_000N CGP 19:43192702-43269530

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0007565 TAS female pregnancy

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041119 ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 protein_coding Danio_rerio
ENSDARG00000076981 zgc:198329 zgc:198329 protein_coding Danio_rerio
ENSDARG00000078177 cxcr3.1 chemokine (C-X-C motif) receptor 3, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000079372 si:ch211-264f5.6 si:ch211-264f5.6 protein_coding Danio_rerio
ENSDARG00000092520 si:dkey-250k15.10 si:dkey-250k15.10 protein_coding Danio_rerio
ENSDARG00000093279 si:dkey-11o1.3 si:dkey-11o1.3 protein_coding Danio_rerio
ENSDARG00000095048 si:dkey-250k15.7 si:dkey-250k15.7 protein_coding Danio_rerio
ENSDARG00000095134 si:dkey-250k15.9 si:dkey-250k15.9 protein_coding Danio_rerio
ENSDARG00000095772 si:dkey-11o1.2 si:dkey-11o1.2 protein_coding Danio_rerio

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