C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TRAF interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183763 TRAIP 9606 - 3:49828599-49856574 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331456 TRAIP-001 49828599-49856567 protein_coding
  ENST00000469027 TRAIP-005 49829256-49856574 protein_coding
  ENST00000473195 TRAIP-004 49829088-49856549 nonsense_mediated_decay
  ENST00000473863 TRAIP-011 49843851-49856559 processed_transcript
  ENST00000475495 TRAIP-006 49831916-49840552 retained_intron
  ENST00000477546 TRAIP-002 49843145-49856564 retained_intron
  ENST00000482243 TRAIP-009 49842496-49856564 protein_coding
  ENST00000482582 TRAIP-007 49839809-49856474 protein_coding
  ENST00000488860 TRAIP-008 49842486-49844587 retained_intron
  ENST00000489948 TRAIP-010 49843716-49856559 retained_intron
  ENST00000491060 TRAIP-003 49828621-49829774 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331456ENST00000469027ENST00000473195ENST00000475495ENST00000477546ENST00000482243ENST00000482582ENST00000489948ENST00000491060
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331456 0.300±0.00 0.187±0.00 N/A 0.169±0.07 N/A 0.151±0.06 0.247±0.00 N/A N/A N/A 0.149±0.00 1.183±0.83 1.056±0.21 3.533±1.97
ENST00000469027 N/A N/A N/A N/A N/A 1.218±0.00 N/A N/A 0.270±0.00 0.275±0.00 N/A N/A 0.406±0.00 N/A
ENST00000473195 N/A N/A N/A N/A 0.286±0.00 N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A
ENST00000475495 N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477546 N/A N/A N/A 0.075±0.00 N/A N/A N/A 0.847±0.00 0.222±0.00 0.176±0.00 N/A N/A N/A N/A
ENST00000482243 N/A N/A N/A N/A N/A 0.778±0.00 N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A
ENST00000482582 0.147±0.00 N/A N/A 0.150±0.08 0.385±0.00 N/A 0.025±0.00 N/A 0.101±0.00 N/A N/A 2.861±0.00 0.988±0.00 5.654±0.00
ENST00000489948 N/A N/A 0.714±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491060 N/A 0.424±0.00 N/A N/A N/A N/A N/A N/A N/A 0.287±0.00 0.088±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005057 IEA receptor signaling protein activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006915 TAS apoptotic process
GO:0007165 TAS signal transduction
GO:0008270 IEA zinc ion binding
GO:0008283 TAS cell proliferation
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011262 traip TRAF-interacting protein protein_coding Danio_rerio
ENSMUSG00000032586 Traip TRAF-interacting protein protein_coding Mus_musculus

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