C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lin-9 DREAM MuvB core complex component
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183814 LIN9 9606 - 1:226231149-226309869 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328205 LIN9-001 226231157-226309733 protein_coding
  ENST00000359525 LIN9-004 226287693-226309071 protein_coding
  ENST00000366808 LIN9-002 226231157-226309869 protein_coding
  ENST00000460719 LIN9-003 226231149-226309172 protein_coding
  ENST00000481685 LIN9-005 226232713-226309254 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328205ENST00000359525ENST00000366808ENST00000460719ENST00000481685
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328205 0.544±0.00 N/A N/A N/A 0.341±0.06 N/A 1.730±1.42 0.748±0.00 0.092±0.00 0.335±0.00 0.118±0.00 0.867±0.24 0.362±0.00 1.479±0.00
ENST00000359525 N/A N/A 0.433±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366808 N/A 0.681±0.00 N/A 0.287±0.06 0.309±0.00 0.226±0.00 0.670±0.00 N/A N/A 0.169±0.07 N/A 0.548±0.30 0.729±0.00 2.272±0.00
ENST00000460719 N/A N/A 0.350±0.00 0.090±0.03 N/A 0.654±0.01 0.640±0.00 0.039±0.00 0.138±0.03 0.413±0.00 0.336±0.00 1.015±0.39 1.061±0.00 1.335±0.65
ENST00000481685 N/A N/A N/A 0.242±0.00 0.482±0.00 0.354±0.00 0.568±0.00 N/A 0.333±0.00 0.153±0.00 0.118±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BW CIL_0000BW_0002 CGP 1:226223618-226309869

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0017053 IEA transcriptional repressor complex
GO:0051726 TAS regulation of cell cycle
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028475 lin9 lin-9 homolog (C. elegans) protein_coding Danio_rerio
ENSDARG00000069253 LIN9 (2 of 2) lin-9 DREAM MuvB core complex component protein_coding Danio_rerio
ENSMUSG00000058729 Lin9 lin-9 homolog (C. elegans) protein_coding Mus_musculus

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