C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase type IVA, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184007 PTP4A2 9606 - 1:31906421-31944856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344035 PTP4A2-201 31906421-31938387 protein_coding
  ENST00000457805 PTP4A2-020 31908534-31919368 protein_coding
  ENST00000468531 PTP4A2-007 31915895-31942576 protein_coding
  ENST00000470404 PTP4A2-006 31908708-31919123 protein_coding
  ENST00000475464 PTP4A2-004 31919569-31937782 processed_transcript
  ENST00000484483 PTP4A2-005 31915540-31919172 retained_intron
  ENST00000489313 PTP4A2-002 31908653-31911280 retained_intron
  ENST00000494444 PTP4A2-003 31919247-31938042 processed_transcript
  ENST00000524384 PTP4A2-013 31919229-31937800 processed_transcript
  ENST00000526960 PTP4A2-014 31919130-31944856 processed_transcript
  ENST00000528253 PTP4A2-015 31910069-31919464 nonsense_mediated_decay
  ENST00000528840 PTP4A2-012 31919244-31937818 processed_transcript
  ENST00000529477 PTP4A2-009 31919260-31938358 processed_transcript
  ENST00000532001 PTP4A2-016 31908839-31919359 nonsense_mediated_decay
  ENST00000532289 PTP4A2-011 31919094-31937886 processed_transcript
  ENST00000533408 PTP4A2-010 31919424-31938186 processed_transcript
  ENST00000534796 PTP4A2-008 31919000-31937785 protein_coding
  ENST00000602683 PTP4A2-021 31908658-31919109 protein_coding
  ENST00000602725 PTP4A2-019 31906421-31919483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344035ENST00000457805ENST00000468531ENST00000470404ENST00000528253ENST00000532001ENST00000602683ENST00000602725
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344035 43.135±0.00 18.901±0.00 3.963±0.00 12.405±4.11 17.238±7.50 16.728±1.93 13.540±7.92 15.980±0.00 9.565±1.20 24.152±16.10 25.108±21.91 13.652±2.87 10.138±4.46 18.897±0.00
ENST00000457805 N/A N/A N/A N/A 14.365±0.00 21.932±0.00 N/A 12.703±0.00 N/A N/A 10.984±0.00 17.343±0.00 N/A 25.254±0.00
ENST00000468531 N/A N/A N/A 47.334±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.678±0.00
ENST00000528253 N/A N/A N/A N/A N/A 34.132±0.00 9.736±0.00 N/A 26.582±0.00 N/A N/A N/A N/A N/A
ENST00000532001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.469±0.00
ENST00000602683 N/A N/A N/A N/A 24.560±0.00 N/A 10.956±0.00 N/A 26.950±0.00 N/A 24.494±0.00 30.502±0.00 N/A N/A
ENST00000602725 51.412±0.00 31.310±0.00 3.696±0.00 16.757±2.22 38.882±0.00 14.684±0.00 11.966±0.00 9.012±6.19 5.889±0.61 19.272±0.00 23.636±14.88 27.678±11.46 19.855±17.33 23.457±5.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0001 VISTA 1:31744429-32345312

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0004727 TAS prenylated protein tyrosine phosphatase activity
GO:0005737 IDA cytoplasm
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0006470 IEA protein dephosphorylation
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035676 ptp4a2b protein tyrosine phosphatase type IVA, member 2b protein_coding Danio_rerio
ENSDARG00000087443 ptp4a2a protein tyrosine phosphatase type IVA, member 2a protein_coding Danio_rerio
ENSMUSG00000028788 Ptp4a2 protein tyrosine phosphatase 4a2 protein_coding Mus_musculus

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