C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TM2 domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184277 TM2D3 9606 - 15:101621444-101652391 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333202 TM2D3-002 101641848-101652367 protein_coding
  ENST00000347970 TM2D3-001 101641846-101652391 protein_coding
  ENST00000428002 TM2D3-005 101632977-101652376 protein_coding
  ENST00000558129 TM2D3-016 101636480-101650161 protein_coding
  ENST00000558677 TM2D3-012 101645088-101652297 nonsense_mediated_decay
  ENST00000559024 TM2D3-004 101646385-101652382 retained_intron
  ENST00000559107 TM2D3-013 101632977-101652384 protein_coding
  ENST00000559891 TM2D3-007 101641848-101646422 retained_intron
  ENST00000560013 TM2D3-003 101641882-101652391 nonsense_mediated_decay
  ENST00000560212 TM2D3-009 101650070-101651998 processed_transcript
  ENST00000560390 TM2D3-008 101633257-101636358 retained_intron
  ENST00000560883 TM2D3-015 101621644-101633697 processed_transcript
  ENST00000560910 TM2D3-011 101646615-101652381 retained_intron
  ENST00000561356 TM2D3-010 101651016-101652381 retained_intron
  ENST00000561373 TM2D3-006 101641851-101650692 protein_coding
  ENST00000619579 TM2D3-017 101621444-101624977 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333202ENST00000347970ENST00000428002ENST00000559024ENST00000559891ENST00000560910ENST00000561373ENST00000619579
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333202 2.571±0.00 6.464±0.00 2.693±0.00 11.576±0.00 2.374±0.00 N/A 4.668±0.00 8.606±0.00 5.778±0.00 N/A N/A 8.222±2.25 5.171±1.15 10.469±2.08
ENST00000347970 11.392±0.00 7.837±0.00 1.572±0.00 27.498±1.78 7.489±2.17 13.900±5.93 5.403±2.77 4.670±2.41 8.660±2.73 13.966±8.44 7.788±6.19 14.802±7.04 11.599±0.24 13.420±5.91
ENST00000428002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.367±0.00
ENST00000559024 N/A N/A N/A N/A N/A N/A N/A 0.799±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559891 N/A N/A N/A N/A N/A N/A 0.895±0.00 0.734±0.00 N/A N/A N/A N/A N/A N/A
ENST00000560910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.907±0.00 N/A N/A N/A
ENST00000561373 N/A N/A N/A N/A 2.880±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619579 0.925±0.00 1.268±0.00 0.537±0.00 N/A 0.946±0.00 N/A 0.951±0.00 1.185±0.00 N/A N/A 0.722±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076618 tm2d3 TM2 domain containing 3 protein_coding Danio_rerio
ENSMUSG00000078681 Tm2d3 TM2 domain containing 3 protein_coding Mus_musculus

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