C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: exportin, tRNA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184575 XPOT 9606 + 12:64404350-64451127 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332707 XPOT-001 64404350-64451127 protein_coding
  ENST00000400935 XPOT-004 64409657-64420185 protein_coding
  ENST00000538086 XPOT-006 64424704-64431679 nonsense_mediated_decay
  ENST00000540203 XPOT-003 64405046-64416736 protein_coding
  ENST00000541842 XPOT-007 64425619-64430210 retained_intron
  ENST00000542958 XPOT-005 64423180-64433434 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332707ENST00000400935
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332707 10.757±0.00 4.183±0.00 1.865±0.00 8.686±0.62 8.864±0.48 7.192±0.00 1.842±1.30 4.818±2.02 3.837±0.47 3.866±2.01 3.131±1.95 7.989±3.75 7.819±3.59 10.595±2.01
ENST00000400935 N/A N/A N/A N/A N/A N/A N/A 4.199±0.00 N/A N/A 2.182±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000049 IDA tRNA binding
GO:0005488 IEA binding
GO:0005634 IDA nucleus
GO:0005643 IDA nuclear pore
GO:0005654 IDA nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006409 IDA tRNA export from nucleus
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002303 xpot exportin, tRNA (nuclear export receptor for tRNAs) protein_coding Danio_rerio
ENSMUSG00000034667 Xpot exportin, tRNA (nuclear export receptor for tRNAs) protein_coding Mus_musculus

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