C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184979 USP18 9606 + 22:18149899-18177397 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000215794 USP18-001 18149899-18177397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215794
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215794 1.728±0.00 2.509±0.00 0.219±0.00 0.402±0.18 2.715±1.52 0.409±0.25 0.503±0.45 2.237±0.00 1.966±1.37 1.462±0.00 0.652±0.00 2.744±1.80 4.000±0.69 2.554±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EW CIL_0005EW_0001 CGP 22:18110331-18177397

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004843 TAS ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0060337 TAS type I interferon signaling pathway
GO:0060338 TAS regulation of type I interferon-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088078 CU571169.4 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000030107 Usp18 ubiquitin specific peptidase 18 protein_coding Mus_musculus

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