C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycoprotein Ib (platelet), alpha polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185245 GP1BA 9606 + 17:4932297-4935030 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329125 GP1BA-001 4932297-4935030 protein_coding
  ENST00000611961 GP1BA-201 4932330-4934979 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329125ENST00000611961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329125 0.227±0.00 27.569±0.00 N/A 0.982±0.00 0.210±0.00 0.157±0.00 0.496±0.00 N/A 0.431±0.00 0.583±0.24 0.192±0.00 0.252±0.04 N/A 0.266±0.00
ENST00000611961 0.227±0.00 N/A 0.441±0.00 0.125±0.00 0.371±0.00 0.539±0.00 0.160±0.09 0.429±0.31 0.077±0.00 0.969±0.00 0.263±0.00 0.203±0.09 0.243±0.15 0.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WF CIL_0004WF_0001 CGP 17:4899418-4935030
CIL_0004WE CIL_0004WE_0001 CGP 17:4932297-4940251

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0005515 IPI:IEA protein binding
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007155 IDA cell adhesion
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007596 IMP blood coagulation
GO:0007597 TAS blood coagulation, intrinsic pathway
GO:0007599 IEA hemostasis
GO:0009986 IDA cell surface
GO:0015057 TAS thrombin receptor activity
GO:0016020 IDA membrane
GO:0030168 TAS platelet activation
GO:0030193 TAS regulation of blood coagulation
GO:0031362 IDA anchored component of external side of plasma membrane
GO:0042730 IDA fibrinolysis
GO:0070062 IDA extracellular vesicular exosome
GO:0070493 TAS thrombin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086846 CU896563.2 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000050675 Gp1ba glycoprotein 1b, alpha polypeptide protein_coding Mus_musculus

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