C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma antigen family A, 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185247 MAGEA11 9606 + X:149688228-149717266 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333104 MAGEA11-201 149688824-149717266 protein_coding
  ENST00000355220 MAGEA11-001 149712078-149717248 protein_coding
  ENST00000412632 MAGEA11-002 149688228-149716459 protein_coding
  ENST00000518694 MAGEA11-003 149688237-149717266 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainOvaryPlacentaTestisENST00000333104ENST00000355220ENST00000412632ENST00000518694
Transcript ID Adipose Brain Ovary Placenta Testis
ENST00000333104 N/A N/A N/A 0.391±0.05 2.917±0.00
ENST00000355220 N/A N/A N/A 0.155±0.00 3.090±2.66
ENST00000412632 0.014±0.00 0.083±0.00 0.036±0.00 N/A N/A
ENST00000518694 N/A N/A N/A 0.127±0.00 0.279±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058212 ndnl2 necdin-like 2 protein_coding Danio_rerio
ENSMUSG00000031118 1700080O16Rik RIKEN cDNA 1700080O16 gene protein_coding Mus_musculus
ENSMUSG00000031179 3830417A13Rik RIKEN cDNA 3830417A13 gene protein_coding Mus_musculus
ENSMUSG00000033343 Magea4 melanoma antigen, family A, 4 protein_coding Mus_musculus
ENSMUSG00000043453 Magea10 melanoma antigen family A, 10 protein_coding Mus_musculus
ENSMUSG00000055746 Magea2 melanoma antigen, family A, 2 protein_coding Mus_musculus
ENSMUSG00000063728 Magea6 melanoma antigen, family A, 6 protein_coding Mus_musculus
ENSMUSG00000079349 Magea5 melanoma antigen, family A, 5 protein_coding Mus_musculus
ENSMUSG00000079350 Magea8 melanoma antigen, family A, 8 protein_coding Mus_musculus
ENSMUSG00000094196 Magea3 melanoma antigen, family A, 3 protein_coding Mus_musculus
ENSMUSG00000096644 Magea1 melanoma antigen, family A, 1 protein_coding Mus_musculus

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