C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Kv channel interacting protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185774 KCNIP4 9606 - 4:20728616-21948799 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359001 KCNIP4-201 20728616-20850779 protein_coding
  ENST00000382148 KCNIP4-001 20728616-21697774 protein_coding
  ENST00000382149 KCNIP4-008 20729916-20983925 processed_transcript
  ENST00000382150 KCNIP4-002 20729210-21303989 protein_coding
  ENST00000382152 KCNIP4-004 20729236-21948799 protein_coding
  ENST00000447367 KCNIP4-003 20729206-21948745 protein_coding
  ENST00000509207 KCNIP4-009 20729638-21544656 protein_coding
  ENST00000512102 KCNIP4-015 21729850-21855715 processed_transcript
  ENST00000515373 KCNIP4-005 20850315-20882710 retained_intron
  ENST00000515786 KCNIP4-006 20730082-21948631 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLungMusclePlacentaTestisENST00000359001ENST00000382148ENST00000382149ENST00000382150ENST00000447367ENST00000509207ENST00000515786
Transcript ID Adipose Adrenal Brain Colon Kidney Lung Muscle Placenta Testis
ENST00000359001 0.136±0.00 0.106±0.00 5.133±0.88 1.506±0.00 1.889±0.00 0.170±0.00 N/A 0.112±0.04 0.551±0.00
ENST00000382148 N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A
ENST00000382149 N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A
ENST00000382150 N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A
ENST00000447367 N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A
ENST00000509207 N/A N/A N/A N/A 1.692±0.00 0.070±0.00 N/A 0.058±0.00 N/A
ENST00000515786 N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OO CIL_0002OO_0001 CGP 4:20253260-20752907
CIL_0002ON CIL_0002ON_0001 CGP 4:20696282-21948799
CIL_00033U CIL_00033U_0002 CGP 4:20728616-22516054

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IEA potassium channel activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005886 IEA plasma membrane
GO:0007165 IEA signal transduction
GO:0016020 IEA membrane
GO:0030425 IEA dendrite
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043025 IEA neuronal cell body
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088100 KCNIP4 Kv channel interacting protein 4 protein_coding Danio_rerio
ENSMUSG00000029088 Kcnip4 Kv channel interacting protein 4 protein_coding Mus_musculus

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