C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 52 (riboflavin transporter), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185803 SLC52A2 9606 + 8:144354135-144361272 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329994 SLC52A2-001 144358593-144361272 protein_coding
  ENST00000402965 SLC52A2-003 144358581-144361270 protein_coding
  ENST00000524541 SLC52A2-010 144354135-144359700 protein_coding
  ENST00000526338 SLC52A2-011 144358577-144360495 protein_coding
  ENST00000526752 SLC52A2-012 144359183-144361271 protein_coding
  ENST00000526779 SLC52A2-008 144359012-144360729 nonsense_mediated_decay
  ENST00000526891 SLC52A2-013 144358990-144360001 processed_transcript
  ENST00000527078 SLC52A2-009 144358565-144361021 protein_coding
  ENST00000530047 SLC52A2-002 144358557-144361270 protein_coding
  ENST00000532815 SLC52A2-006 144354644-144359297 processed_transcript
  ENST00000532887 SLC52A2-004 144358593-144361241 protein_coding
  ENST00000533662 SLC52A2-007 144358595-144359899 retained_intron
  ENST00000534725 SLC52A2-005 144358593-144360009 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000402965ENST00000524541ENST00000526752ENST00000526779ENST00000527078ENST00000530047ENST00000532887
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000402965 N/A N/A N/A N/A N/A N/A 2.178±0.00 4.042±0.00 N/A N/A N/A N/A N/A N/A
ENST00000524541 N/A N/A N/A N/A N/A N/A N/A N/A 0.446±0.00 N/A N/A N/A N/A N/A
ENST00000526752 N/A N/A N/A N/A N/A 3.686±1.39 1.540±0.00 N/A 0.588±0.00 N/A N/A N/A N/A N/A
ENST00000526779 N/A N/A N/A N/A 1.602±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527078 N/A N/A N/A N/A N/A 0.856±0.00 N/A N/A N/A N/A 0.138±0.00 16.749±0.00 N/A 5.423±0.00
ENST00000530047 20.377±0.00 12.437±0.00 0.723±0.00 4.585±0.00 8.308±5.87 7.707±0.00 1.757±0.00 14.354±0.00 1.580±0.90 8.760±0.00 N/A 13.718±6.73 23.331±6.98 12.378±4.04
ENST00000532887 N/A N/A N/A 0.533±0.00 N/A N/A 1.332±0.00 N/A N/A N/A N/A 7.065±0.00 14.876±0.24 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001618 IEA virus receptor activity
GO:0005887 IDA integral component of plasma membrane
GO:0009615 IEA response to virus
GO:0032217 IDA riboflavin transporter activity
GO:0032218 IDA riboflavin transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022560 Slc52a2 solute carrier protein 52, member 2 protein_coding Mus_musculus

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