C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear pore complex interacting protein family, member B4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185864 NPIPB4 9606 - 16:21834569-21880827 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000165086 NPIPB4-012 21837474-21843412 processed_transcript
  ENST00000341400 NPIPB4-004 21843443-21857657 protein_coding
  ENST00000415645 NPIPB4-201 21834569-21857418 protein_coding
  ENST00000518761 NPIPB4-001 21843486-21857662 protein_coding
  ENST00000520808 NPIPB4-002 21843744-21857660 nonsense_mediated_decay
  ENST00000529969 NPIPB4-003 21847482-21857682 nonsense_mediated_decay
  ENST00000536041 NPIPB4-018 21847453-21863837 nonsense_mediated_decay
  ENST00000537951 NPIPB4-202 21834671-21837770 protein_coding
  ENST00000538859 NPIPB4-014 21857335-21880827 processed_transcript
  ENST00000539191 NPIPB4-009 21847414-21851255 processed_transcript
  ENST00000539318 NPIPB4-019 21843386-21863833 processed_transcript
  ENST00000540103 NPIPB4-005 21851949-21857616 processed_transcript
  ENST00000541329 NPIPB4-010 21837724-21843490 processed_transcript
  ENST00000541674 NPIPB4-017 21857292-21864103 protein_coding
  ENST00000542133 NPIPB4-006 21837624-21857602 nonsense_mediated_decay
  ENST00000542338 NPIPB4-008 21847412-21851519 processed_transcript
  ENST00000543449 NPIPB4-015 21857043-21880299 processed_transcript
  ENST00000543654 NPIPB4-007 21843716-21852220 protein_coding
  ENST00000543660 NPIPB4-011 21837693-21843480 retained_intron
  ENST00000544693 NPIPB4-016 21857297-21866308 protein_coding
  ENST00000545367 NPIPB4-013 21837564-21839878 retained_intron
  ENST00000614197 NPIPB4-203 21838489-21851207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000415645ENST00000539318ENST00000541329ENST00000541674ENST00000542133ENST00000542338ENST00000543654
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000415645 3.796±0.00 14.699±0.00 1.275±0.00 1.728±1.26 8.453±0.00 1.658±0.83 1.362±1.27 5.731±0.00 1.295±0.00 4.839±4.34 1.638±1.30 4.663±3.36 1.177±0.43 3.336±0.98
ENST00000539318 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.916±0.00 N/A N/A N/A N/A
ENST00000541329 N/A N/A 10.382±0.00 N/A 17.745±0.00 12.392±0.00 1.375±0.00 5.388±0.00 13.984±0.00 10.935±0.00 5.764±0.00 10.269±3.56 N/A N/A
ENST00000541674 N/A N/A N/A N/A 7.763±0.00 4.372±0.00 0.898±0.00 2.405±0.00 N/A N/A N/A 3.023±0.00 N/A N/A
ENST00000542133 N/A N/A N/A N/A 3.527±0.00 N/A N/A N/A N/A N/A 1.027±0.00 0.792±0.00 N/A N/A
ENST00000542338 10.505±0.00 38.228±0.00 N/A 14.195±0.00 23.658±0.00 9.696±0.00 N/A N/A N/A N/A 11.500±0.00 N/A N/A 63.095±52.29
ENST00000543654 N/A N/A N/A N/A 13.045±0.00 N/A N/A 6.623±0.00 1.089±0.00 N/A N/A 9.016±0.00 1.470±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

No Homologs available.

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