C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 16B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186648 LRRC16B 9606 + 14:24052000-24069728 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342740 LRRC16B-001 24052000-24069728 protein_coding
  ENST00000559694 LRRC16B-003 24057215-24069726 retained_intron
  ENST00000560349 LRRC16B-002 24061919-24069724 retained_intron
  ENST00000561354 LRRC16B-004 24060741-24061930 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000342740ENST00000559694ENST00000560349ENST00000561354
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000342740 0.043±0.00 0.135±0.00 0.368±0.00 N/A 0.113±0.00 N/A 0.032±0.00 N/A 0.141±0.10 0.061±0.02 1.477±0.21
ENST00000559694 N/A 0.079±0.00 0.170±0.00 N/A N/A 0.027±0.00 N/A N/A 0.116±0.09 0.023±0.00 0.289±0.00
ENST00000560349 N/A 0.157±0.00 0.269±0.00 N/A 0.017±0.00 N/A N/A 0.032±0.00 N/A 0.040±0.02 N/A
ENST00000561354 N/A N/A 0.475±0.00 0.286±0.00 N/A N/A N/A N/A N/A N/A 1.484±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031I CIL_00031I_0001 CGP 14:23969874-24069728
CIL_00031H CIL_00031H_0001 CGP 14:24052000-24078100

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086990 LRRC16B leucine rich repeat containing 16B protein_coding Danio_rerio
ENSMUSG00000022211 Lrrc16b leucine rich repeat containing 16B protein_coding Mus_musculus

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