C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, DHHC-type containing 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186908 ZDHHC17 9606 + 12:76763588-76853696 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000426126 ZDHHC17-001 76763588-76853696 protein_coding
  ENST00000546778 ZDHHC17-002 76764103-76827016 nonsense_mediated_decay
  ENST00000547604 ZDHHC17-007 76764258-76809793 nonsense_mediated_decay
  ENST00000547620 ZDHHC17-004 76764253-76809842 nonsense_mediated_decay
  ENST00000547673 ZDHHC17-016 76848238-76849669 retained_intron
  ENST00000549010 ZDHHC17-011 76840059-76842090 processed_transcript
  ENST00000549682 ZDHHC17-009 76764573-76809763 protein_coding
  ENST00000549944 ZDHHC17-010 76797519-76822490 nonsense_mediated_decay
  ENST00000550163 ZDHHC17-008 76764298-76822529 nonsense_mediated_decay
  ENST00000550244 ZDHHC17-015 76846291-76851392 retained_intron
  ENST00000550789 ZDHHC17-012 76840391-76848360 processed_transcript
  ENST00000550876 ZDHHC17-005 76764254-76826982 protein_coding
  ENST00000551407 ZDHHC17-006 76764258-76809750 nonsense_mediated_decay
  ENST00000552453 ZDHHC17-003 76764244-76826914 nonsense_mediated_decay
  ENST00000552693 ZDHHC17-014 76843914-76848337 retained_intron
  ENST00000553091 ZDHHC17-013 76844875-76849466 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000426126ENST00000550163ENST00000550244ENST00000552453ENST00000552693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000426126 1.269±0.00 3.046±0.00 0.869±0.00 13.136±4.07 2.214±1.17 2.062±1.10 1.530±0.97 0.779±0.31 2.253±1.41 2.202±0.40 1.514±0.48 3.521±0.40 1.627±0.17 2.910±0.00
ENST00000550163 N/A N/A N/A N/A N/A N/A N/A 2.836±0.00 N/A N/A 2.678±0.00 N/A N/A N/A
ENST00000550244 N/A N/A N/A N/A N/A 2.676±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552453 N/A N/A 5.583±0.00 N/A 7.409±0.00 4.167±0.00 2.464±0.00 N/A 9.534±0.00 6.732±0.00 4.158±0.00 N/A N/A N/A
ENST00000552693 N/A N/A N/A N/A N/A N/A N/A 1.121±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B9 CIL_0002B9_0002 CGP 12:76351797-76853696
CIL_0002BC CIL_0002BC_0002 CGP 12:76763588-76879060

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0004871 IMP signal transducer activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0007165 IMP signal transduction
GO:0008270 IEA zinc ion binding
GO:0015095 IDA magnesium ion transmembrane transporter activity
GO:0015693 IDA magnesium ion transport
GO:0016021 IEA integral component of membrane
GO:0016409 IDA palmitoyltransferase activity
GO:0018345 IDA protein palmitoylation
GO:0019706 IDA protein-cysteine S-palmitoyltransferase activity
GO:0030660 IDA Golgi-associated vesicle membrane
GO:0042802 IPI identical protein binding
GO:0042953 IDA lipoprotein transport
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070441 zdhhc17 zinc finger, DHHC-type containing 17 protein_coding Danio_rerio
ENSMUSG00000035798 Zdhhc17 zinc finger, DHHC domain containing 17 protein_coding Mus_musculus

Loading