C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 183, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186973 FAM183A 9606 + 1:43145153-43156396 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335282 FAM183A-001 43147952-43156396 protein_coding
  ENST00000409337 FAM183A-006 43147867-43156396 processed_transcript
  ENST00000409396 FAM183A-005 43147923-43156279 protein_coding
  ENST00000410025 FAM183A-002 43147917-43156396 nonsense_mediated_decay
  ENST00000410048 FAM183A-003 43145153-43156396 protein_coding
  ENST00000481753 FAM183A-004 43152758-43156396 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000335282ENST00000409337ENST00000409396ENST00000410025ENST00000410048ENST00000481753
Transcript ID Adrenal Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000335282 N/A N/A N/A N/A 0.381±0.00 13.144±0.00 1.764±1.56 0.999±0.00 2.994±1.73
ENST00000409337 N/A 0.837±0.00 N/A N/A 0.225±0.00 26.631±0.00 2.933±3.91 0.192±0.05 0.532±0.00
ENST00000409396 N/A N/A N/A 0.165±0.00 N/A 8.593±0.00 4.594±0.00 N/A 3.281±0.00
ENST00000410025 N/A 0.824±0.00 N/A N/A N/A N/A 11.018±0.00 N/A 0.421±0.00
ENST00000410048 N/A N/A 0.249±0.00 0.080±0.00 0.141±0.00 N/A N/A 0.218±0.07 N/A
ENST00000481753 0.051±0.00 N/A N/A N/A N/A 0.662±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0001 VISTA 1:42758169-43359178

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087144 FAM183B family with sequence similarity 183, member B protein_coding Danio_rerio
ENSMUSG00000049154 Fam183b family with sequence similarity 183, member B protein_coding Mus_musculus

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