C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tet methylcytosine dioxygenase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187605 TET3 9606 + 2:73986404-74108176 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305799 TET3-004 74002713-74102176 protein_coding
  ENST00000409262 TET3-001 73986404-74108176 protein_coding
  ENST00000475405 TET3-005 74047160-74073904 retained_intron
  ENST00000496886 TET3-002 73986526-73993740 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409262
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409262 1.396±0.00 1.296±0.00 0.874±0.00 1.744±0.57 0.763±0.47 1.424±0.85 0.144±0.05 0.642±0.00 0.546±0.00 1.642±0.00 0.213±0.00 2.622±2.30 1.377±0.26 0.757±0.59

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001939 IEA female pronucleus
GO:0001940 ISS male pronucleus
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0006493 IMP protein O-linked glycosylation
GO:0008270 IEA zinc ion binding
GO:0044727 ISS DNA demethylation of male pronucleus
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process
GO:0070579 ISS methylcytosine dioxygenase activity
GO:0080111 ISS DNA demethylation
GO:0080182 IMP histone H3-K4 trimethylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062646 tet3 tet methylcytosine dioxygenase 3 protein_coding Danio_rerio
ENSMUSG00000034832 Tet3 tet methylcytosine dioxygenase 3 protein_coding Mus_musculus

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