C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: T-cell leukemia/lymphoma 6 (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187621 TCL6 9606 + 14:95650498-95679833 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352367 TCL6-006 95663256-95679833 lincRNA
  ENST00000357168 TCL6-001 95650498-95671560 retained_intron
  ENST00000459662 TCL6-003 95651178-95673452 lincRNA
  ENST00000460130 TCL6-002 95650501-95654647 lincRNA
  ENST00000465501 TCL6-013 95669484-95678100 retained_intron
  ENST00000467865 TCL6-009 95663256-95673452 lincRNA
  ENST00000483087 TCL6-004 95651178-95671850 lincRNA
  ENST00000484207 TCL6-005 95663256-95671850 retained_intron
  ENST00000486671 TCL6-012 95664862-95670414 retained_intron
  ENST00000495696 TCL6-014 95670442-95677136 lincRNA
  ENST00000497248 TCL6-008 95663256-95679833 retained_intron
  ENST00000610999 TCL6-201 95652377-95652489 misc_RNA
  ENST00000619182 TCL6-202 95670439-95678100 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000352367ENST00000357168ENST00000459662ENST00000460130ENST00000467865ENST00000483087ENST00000486671ENST00000497248ENST00000619182
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000352367 N/A 0.291±0.00 0.105±0.00 0.114±0.00 0.035±0.00 0.028±0.00 0.106±0.00 0.018±0.00 0.102±0.00 N/A N/A N/A 0.145±0.00
ENST00000357168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.309±0.00
ENST00000459662 N/A 0.205±0.00 N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A
ENST00000460130 0.050±0.00 N/A 0.033±0.00 0.713±0.00 0.151±0.00 0.333±0.00 0.700±0.00 0.160±0.12 0.169±0.00 0.093±0.00 0.561±0.07 3.691±1.55 1.041±0.42
ENST00000467865 0.017±0.00 N/A 0.046±0.00 0.036±0.00 0.010±0.00 N/A N/A N/A 0.102±0.00 N/A 0.055±0.01 N/A N/A
ENST00000483087 N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A 0.009±0.00 0.060±0.00 0.757±0.00 N/A
ENST00000486671 N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 0.010±0.00 0.161±0.02 N/A N/A
ENST00000497248 0.012±0.00 N/A 0.029±0.00 N/A N/A 0.017±0.00 0.064±0.00 N/A 0.015±0.00 N/A N/A N/A N/A
ENST00000619182 N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A 1.241±0.00 0.283±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085I CIL_00085I_0001 VISTA 14:95070077-95673144
CIL_00099M CIL_00099M_0001 VISTA 14:95131820-95732594
CIL_0008Z4 CIL_0008Z4_0001 VISTA 14:95131888-95732401
CIL_0007EZ CIL_0007EZ_0001 CGP 14:95533503-95692643

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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