C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cysteine/histidine-rich 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187954 CYHR1 9606 - 8:144449582-144465677 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306145 CYHR1-003 144463817-144465677 protein_coding
  ENST00000403000 CYHR1-005 144463817-144465489 protein_coding
  ENST00000424149 CYHR1-004 144463817-144465648 protein_coding
  ENST00000438911 CYHR1-001 144449582-144465035 protein_coding
  ENST00000524623 CYHR1-013 144464581-144465428 retained_intron
  ENST00000526887 CYHR1-011 144450576-144465430 protein_coding
  ENST00000528558 CYHR1-014 144452036-144462415 retained_intron
  ENST00000528663 CYHR1-007 144449582-144457641 retained_intron
  ENST00000530374 CYHR1-002 144449931-144462861 protein_coding
  ENST00000530637 CYHR1-008 144464578-144465667 protein_coding
  ENST00000533173 CYHR1-006 144451120-144457928 retained_intron
  ENST00000533764 CYHR1-012 144464275-144465434 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306145ENST00000403000ENST00000424149ENST00000438911ENST00000524623ENST00000526887ENST00000528558ENST00000528663ENST00000530374ENST00000533173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306145 N/A N/A N/A N/A N/A 3.888±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403000 N/A 3.461±0.00 N/A N/A 4.356±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424149 N/A N/A N/A 1.336±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438911 N/A 2.467±0.00 N/A 1.420±0.00 1.352±0.94 N/A 2.469±0.00 N/A 0.638±0.00 0.333±0.00 1.984±0.25 4.402±4.13 6.501±1.75 9.363±3.49
ENST00000524623 N/A N/A N/A N/A N/A 1.961±0.00 N/A N/A 1.602±0.00 N/A N/A N/A N/A N/A
ENST00000526887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.546±0.00 N/A N/A
ENST00000528558 N/A N/A 0.606±0.00 N/A 0.779±0.00 0.733±0.00 N/A N/A N/A 2.953±0.00 N/A N/A N/A N/A
ENST00000528663 N/A N/A 0.235±0.00 N/A 0.423±0.00 0.260±0.00 N/A 0.989±0.00 N/A 0.155±0.00 N/A N/A N/A 1.246±0.00
ENST00000530374 6.676±0.00 5.753±0.00 0.500±0.00 4.611±2.58 2.855±2.34 10.486±0.00 4.564±3.52 4.176±3.13 4.481±3.78 10.403±0.00 6.657±3.68 12.409±3.00 8.112±0.87 30.886±7.73
ENST00000533173 0.978±0.00 1.714±0.00 N/A 0.918±0.00 0.975±0.00 0.408±0.30 0.070±0.00 0.829±0.26 0.152±0.00 N/A 0.417±0.00 2.018±1.37 1.236±0.00 5.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_00026P CIL_00026P_0001 CGP 8:144428775-144465677
CIL_0005WV CIL_0005WV_0001 CGP 8:144449582-144474202

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005635 IEA nuclear envelope
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061057 cyhr1 cysteine/histidine-rich 1 protein_coding Danio_rerio
ENSMUSG00000053929 Cyhr1 cysteine and histidine rich 1 protein_coding Mus_musculus

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