C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188002 RP11-43F13.1 9606 - 5:1598920-1634005 transcribed_unprocessed_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343123 RP11-43F13.1-006 1629001-1633984 processed_transcript
  ENST00000502273 RP11-43F13.1-001 1602691-1633906 transcribed_unprocessed_pseudogene
  ENST00000507290 RP11-43F13.1-004 1598920-1633981 processed_transcript
  ENST00000507505 RP11-43F13.1-007 1599121-1634002 processed_transcript
  ENST00000507841 RP11-43F13.1-003 1598920-1634005 processed_transcript
  ENST00000512335 RP11-43F13.1-002 1598920-1634004 processed_transcript
  ENST00000522848 RP11-43F13.1-008 1601916-1633947 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343123ENST00000502273ENST00000507290ENST00000507505ENST00000507841ENST00000512335
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343123 0.742±0.00 0.752±0.00 N/A 0.478±0.00 0.352±0.00 0.376±0.00 0.705±0.00 N/A 0.213±0.00 0.828±0.00 0.462±0.00 0.786±0.36 0.189±0.00 N/A
ENST00000502273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.675±0.00 N/A N/A
ENST00000507290 N/A N/A 0.717±0.00 1.004±0.00 0.635±0.00 N/A N/A N/A 0.366±0.00 N/A N/A 1.272±0.51 0.213±0.16 4.200±1.73
ENST00000507505 N/A N/A N/A 0.815±0.00 1.168±0.00 N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A N/A
ENST00000507841 0.206±0.00 N/A N/A 0.315±0.07 0.326±0.00 0.109±0.04 0.286±0.00 0.722±0.00 N/A 0.227±0.00 0.104±0.00 0.491±0.00 0.181±0.00 0.275±0.00
ENST00000512335 0.206±0.00 1.203±0.00 N/A 0.570±0.00 0.480±0.20 0.376±0.00 1.141±0.00 1.547±0.00 0.322±0.00 0.471±0.03 0.124±0.00 0.657±0.40 0.299±0.21 0.430±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q6 CIL_0008Q6_0001 VISTA 5:1540437-2141987

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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