C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB42, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188060 RAB42 9606 + 1:28592200-28595443 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373826 RAB42-001 28592200-28595443 protein_coding
  ENST00000465518 RAB42-002 28592515-28594300 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLungMusclePlacentaTestisENST00000373826ENST00000465518
Transcript ID Adrenal Brain Colon Heart Kidney Lung Muscle Placenta Testis
ENST00000373826 1.173±0.00 0.214±0.17 0.204±0.00 0.144±0.00 0.297±0.00 0.486±0.00 0.090±0.04 0.470±0.05 0.345±0.00
ENST00000465518 N/A N/A N/A N/A N/A N/A N/A N/A 0.405±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0001 VISTA 1:28583201-29186892
CIL_0001X2 CIL_0001X2_0001 CGP 1:28589323-28643085
CIL_0003PX CIL_0003PX_0002 CGP 1:28592200-28719353

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034215 rab42a RAB42, member RAS oncogene family a protein_coding Danio_rerio
ENSMUSG00000089687 Rab42 RAB42, member RAS oncogene family protein_coding Mus_musculus

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