C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: smoothelin-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188176 SMTNL2 9606 + 17:4583999-4608319 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338859 SMTNL2-001 4583999-4608319 protein_coding
  ENST00000389313 SMTNL2-002 4584539-4608314 protein_coding
  ENST00000570526 SMTNL2-004 4595066-4596954 retained_intron
  ENST00000572951 SMTNL2-003 4592355-4595260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338859ENST00000389313ENST00000570526
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338859 N/A N/A N/A 0.053±0.00 0.954±0.29 0.562±0.00 0.537±0.28 N/A 0.786±0.00 0.018±0.00 3.200±0.00 3.864±4.57 0.691±0.19 0.349±0.00
ENST00000389313 0.768±0.00 0.321±0.00 2.318±0.00 0.860±0.00 5.528±0.00 N/A 1.093±0.77 25.176±0.00 0.052±0.00 1.845±0.00 97.102±92.24 2.863±3.12 1.437±0.14 1.415±1.30
ENST00000570526 1.362±0.00 N/A N/A 0.179±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055632 smtnl smoothelin, like protein_coding Danio_rerio
ENSDARG00000092305 poldip2 polymerase (DNA-directed), delta interacting protein 2 protein_coding Danio_rerio
ENSMUSG00000045667 Smtnl2 smoothelin-like 2 protein_coding Mus_musculus

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