C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RUN and FYVE domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188282 RUFY4 9606 + 2:218034960-218090581 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344321 RUFY4-201 218070496-218090580 protein_coding
  ENST00000374155 RUFY4-002 218069255-218090580 protein_coding
  ENST00000457754 RUFY4-001 218034988-218090581 nonsense_mediated_decay
  ENST00000463618 RUFY4-006 218035069-218070514 processed_transcript
  ENST00000463872 RUFY4-009 218072871-218075720 processed_transcript
  ENST00000465568 RUFY4-007 218035096-218070838 processed_transcript
  ENST00000472496 RUFY4-005 218069014-218070817 processed_transcript
  ENST00000480164 RUFY4-003 218068986-218070623 processed_transcript
  ENST00000495721 RUFY4-008 218070306-218072499 retained_intron
  ENST00000497857 RUFY4-004 218034960-218068849 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000344321ENST00000374155ENST00000457754ENST00000463618ENST00000463872ENST00000472496ENST00000480164ENST00000495721
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000344321 0.042±0.00 0.022±0.00 N/A 0.020±0.00 N/A N/A 0.048±0.00 N/A N/A 0.022±0.00 0.023±0.00 N/A
ENST00000374155 N/A N/A 0.087±0.00 N/A N/A N/A N/A N/A N/A 0.076±0.00 0.034±0.00 N/A
ENST00000457754 N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A 0.033±0.00 N/A N/A N/A
ENST00000463618 N/A N/A N/A 0.260±0.00 N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A
ENST00000463872 N/A N/A N/A N/A 0.221±0.00 N/A N/A 0.025±0.00 N/A 0.161±0.00 N/A 0.039±0.00
ENST00000472496 N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480164 N/A N/A N/A 0.146±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495721 N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0001 VISTA 2:217636448-218238840
CIL_0005MB CIL_0005MB_0001 CGP 2:217799789-218090581
CIL_0005VO CIL_0005VO_0001 CGP 2:218034960-218137253

Gene Ontology
GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000061815 Rufy4 RUN and FYVE domain containing 4 protein_coding Mus_musculus

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