C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 38, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188338 SLC38A3 9606 + 3:50205246-50221486 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000417121 SLC38A3-003 50217917-50218680 retained_intron
  ENST00000417851 SLC38A3-004 50217736-50218668 retained_intron
  ENST00000439524 SLC38A3-005 50215267-50217293 retained_intron
  ENST00000445096 SLC38A3-007 50205286-50218672 protein_coding
  ENST00000610458 SLC38A3-008 50205246-50214757 protein_coding
  ENST00000614032 SLC38A3-001 50205246-50221486 protein_coding
  ENST00000620404 SLC38A3-002 50205279-50214914 retained_intron
  ENST00000621456 SLC38A3-009 50207683-50214768 protein_coding
  ENST00000621714 SLC38A3-006 50205268-50217995 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000417121ENST00000417851ENST00000439524ENST00000445096ENST00000610458ENST00000614032ENST00000620404ENST00000621714
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000417121 N/A N/A N/A N/A N/A N/A N/A 1.487±0.00 N/A N/A N/A N/A N/A N/A
ENST00000417851 N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439524 N/A N/A 1.352±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.546±0.00
ENST00000445096 N/A N/A N/A N/A 0.323±0.05 N/A N/A N/A 0.093±0.00 N/A 1.507±0.00 0.346±0.00 N/A N/A
ENST00000610458 0.254±0.00 0.087±0.00 0.803±0.00 N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614032 0.044±0.00 0.045±0.00 0.085±0.00 3.698±2.93 0.187±0.15 0.046±0.00 0.501±0.32 11.499±9.93 6.206±0.00 0.015±0.00 1.333±0.62 2.535±0.84 0.714±0.43 0.527±0.38
ENST00000620404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.206±0.00 0.110±0.00 N/A
ENST00000621714 N/A N/A N/A 0.618±0.00 0.290±0.08 N/A N/A N/A N/A N/A 3.671±2.28 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005290 IDA L-histidine transmembrane transporter activity
GO:0005886 IDA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0006865 TAS amino acid transport
GO:0006867 IDA asparagine transport
GO:0006868 IDA glutamine transport
GO:0015180 IDA L-alanine transmembrane transporter activity
GO:0015182 IDA L-asparagine transmembrane transporter activity
GO:0015186 IDA L-glutamine transmembrane transporter activity
GO:0015293 IEA symporter activity
GO:0015297 IEA antiporter activity
GO:0015808 IDA L-alanine transport
GO:0015817 IDA histidine transport
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027065 slc38a3a solute carrier family 38, member 3a protein_coding Danio_rerio
ENSDARG00000091061 slc38a3b solute carrier family 38, member 3b protein_coding Danio_rerio
ENSMUSG00000010064 Slc38a3 solute carrier family 38, member 3 protein_coding Mus_musculus

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