C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 548
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188785 ZNF548 9606 + 19:57389850-57401418 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336128 ZNF548-002 57389897-57400163 protein_coding
  ENST00000366197 ZNF548-001 57389850-57401418 protein_coding
  ENST00000594668 ZNF548-008 57390453-57398436 protein_coding
  ENST00000594693 ZNF548-006 57390283-57397157 protein_coding
  ENST00000596282 ZNF548-007 57389875-57398450 protein_coding
  ENST00000597047 ZNF548-004 57390005-57398714 nonsense_mediated_decay
  ENST00000597400 ZNF548-011 57389875-57398598 protein_coding
  ENST00000597576 ZNF548-009 57396905-57398818 retained_intron
  ENST00000598895 ZNF548-010 57389884-57397351 protein_coding
  ENST00000600442 ZNF548-005 57390005-57397164 nonsense_mediated_decay
  ENST00000600927 ZNF548-012 57390746-57398621 protein_coding
  ENST00000602086 ZNF548-003 57389965-57398535 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000336128ENST00000366197
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000336128 N/A N/A N/A 1.127±0.00 N/A N/A N/A 1.887±0.35 3.763±0.00 N/A 2.702±0.00
ENST00000366197 3.185±0.00 4.079±0.00 1.148±0.22 1.693±0.01 1.208±0.72 1.136±0.00 1.328±0.00 1.981±0.00 2.774±1.23 0.896±0.00 1.703±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

No Homologs available.

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