C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane channel-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188869 TMC3 9606 - 15:81331217-81374213 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359440 TMC3-001 81331217-81374213 protein_coding
  ENST00000558726 TMC3-004 81331217-81374213 protein_coding
  ENST00000559982 TMC3-002 81337642-81374156 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000359440ENST00000558726ENST00000559982
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000359440 0.039±0.00 0.060±0.00 0.057±0.01 0.020±0.00 0.154±0.00 0.017±0.00 0.046±0.00 0.135±0.00 0.022±0.00 0.030±0.01 0.056±0.01 0.266±0.13
ENST00000558726 0.039±0.00 0.060±0.00 0.048±0.00 0.020±0.00 0.147±0.00 0.014±0.00 0.045±0.00 N/A 0.021±0.00 0.029±0.02 0.055±0.01 0.137±0.00
ENST00000559982 N/A N/A N/A 0.088±0.06 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0001 VISTA 15:80790387-81397930
CIL_00071F CIL_00071F_0002 CGP 15:81331217-82046141

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052723 TMC3 transmembrane channel-like 3 protein_coding Danio_rerio
ENSMUSG00000038540 Tmc3 transmembrane channel-like gene family 3 protein_coding Mus_musculus

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