C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hematological and neurological expressed 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000189159 HN1 9606 - 17:75135248-75168281 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304834 HN1-003 75135307-75154675 nonsense_mediated_decay
  ENST00000356033 HN1-004 75135307-75154675 protein_coding
  ENST00000409753 HN1-001 75135248-75154683 protein_coding
  ENST00000465454 HN1-009 75147784-75154512 processed_transcript
  ENST00000470924 HN1-012 75135886-75153866 protein_coding
  ENST00000476258 HN1-005 75135248-75154243 protein_coding
  ENST00000481094 HN1-007 75135984-75146780 retained_intron
  ENST00000481647 HN1-010 75135992-75153826 protein_coding
  ENST00000482348 HN1-006 75135286-75153293 protein_coding
  ENST00000580380 HN1-014 75136148-75168281 protein_coding
  ENST00000581874 HN1-013 75136201-75154512 protein_coding
  ENST00000584079 HN1-015 75147538-75168261 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaTestisENST00000409753ENST00000481647
Transcript ID Muscle Ovary Placenta Testis
ENST00000409753 2.199±0.00 N/A 55.380±34.91 31.497±0.00
ENST00000481647 N/A 94.603±0.00 82.838±27.65 159.928±45.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0001JI CIL_0001JI_0001 CGP 17:75130225-75168281
CIL_0001HE CIL_0001HE_0001 CGP 17:75135248-75182983

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0032502 IEA developmental process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029419 hn1b hematological and neurological expressed 1b protein_coding Danio_rerio
ENSDARG00000054002 hn1a hematological and neurological expressed 1a protein_coding Danio_rerio
ENSMUSG00000020737 Hn1 hematological and neurological expressed sequence 1 protein_coding Mus_musculus

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