C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: S100 calcium binding protein A13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000189171 S100A13 9606 - 1:153618787-153634092 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339556 S100A13-001 153618799-153628180 protein_coding
  ENST00000368699 S100A13-201 153618804-153634092 protein_coding
  ENST00000392622 S100A13-202 153618804-153627048 protein_coding
  ENST00000392623 S100A13-203 153618804-153627268 protein_coding
  ENST00000440685 S100A13-204 153618802-153628239 protein_coding
  ENST00000476133 S100A13-002 153618787-153628248 processed_transcript
  ENST00000491177 S100A13-006 153618808-153631360 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000339556ENST00000392623ENST00000440685
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000339556 87.089±0.00 73.255±0.00 N/A 69.909±12.74 109.834±98.75 60.027±45.68 N/A 19.618±1.44 112.238±0.00 89.371±54.41 85.213±37.37 54.591±29.17
ENST00000392623 N/A N/A 5.924±0.00 N/A 9.400±0.00 N/A 93.015±0.00 N/A 10.030±0.00 11.306±0.00 N/A N/A
ENST00000440685 N/A N/A N/A N/A N/A N/A 7.573±0.00 N/A N/A 9.454±0.00 22.720±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005507 IDA copper ion binding
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0008270 IDA zinc ion binding
GO:0008284 IEA positive regulation of cell proliferation
GO:0008289 IEA lipid binding
GO:0008360 IEA regulation of cell shape
GO:0017134 IPI fibroblast growth factor binding
GO:0042629 NAS mast cell granule
GO:0042803 IPI protein homodimerization activity
GO:0043123 IDA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043303 NAS mast cell degranulation
GO:0046688 IEA response to copper ion
GO:0048471 IDA perinuclear region of cytoplasm
GO:0050663 IMP cytokine secretion
GO:0050703 IDA interleukin-1 alpha secretion
GO:0050786 IPI RAGE receptor binding
GO:0051602 IEA response to electrical stimulus
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093628 s100a11 S100 calcium binding protein A11 protein_coding Danio_rerio
ENSMUSG00000042312 S100a13 S100 calcium binding protein A13 protein_coding Mus_musculus

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