C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 179, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000189350 FAM179A 9606 + 2:28956611-29061373 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379558 FAM179A-003 28981298-29061373 protein_coding
  ENST00000401723 FAM179A-007 28956611-29033520 protein_coding
  ENST00000420297 FAM179A-004 28970939-28999248 protein_coding
  ENST00000440012 FAM179A-005 29018261-29024374 protein_coding
  ENST00000460951 FAM179A-006 29032771-29036587 retained_intron
  ENST00000465300 FAM179A-001 29014467-29052230 processed_transcript
  ENST00000475900 FAM179A-002 29033431-29052230 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379558ENST00000401723ENST00000440012ENST00000460951ENST00000465300ENST00000475900
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379558 0.036±0.00 0.113±0.00 0.034±0.00 0.040±0.03 0.030±0.01 0.042±0.00 0.105±0.02 0.028±0.02 0.031±0.00 0.266±0.00 N/A 0.086±0.07 0.031±0.03 0.081±0.01
ENST00000401723 N/A N/A 0.765±0.00 N/A N/A N/A N/A N/A N/A N/A 1.033±0.00 N/A N/A N/A
ENST00000440012 N/A N/A N/A N/A 0.471±0.00 N/A N/A N/A N/A N/A N/A 0.583±0.00 N/A N/A
ENST00000460951 N/A N/A N/A 0.690±0.29 N/A N/A N/A N/A N/A 1.338±0.00 N/A 0.600±0.00 N/A N/A
ENST00000465300 N/A N/A N/A 0.299±0.19 0.137±0.00 N/A 2.178±0.00 0.629±0.00 N/A 4.601±0.00 1.474±0.46 3.413±2.81 0.266±0.15 0.672±0.04
ENST00000475900 0.082±0.00 0.155±0.00 N/A 0.135±0.00 0.061±0.02 0.031±0.00 0.113±0.00 0.072±0.00 0.011±0.00 0.094±0.00 0.062±0.00 0.069±0.00 0.021±0.00 0.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013N CIL_00013N_0001 CGP 2:28894643-29061373
CIL_00013O CIL_00013O_0001 CGP 2:28956611-29074261

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000045761 Fam179a family with sequence similarity 179, member A protein_coding Mus_musculus

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