C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat, sterile alpha motif and U-box domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196151 WDSUB1 9606 - 2:159235793-159286799 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358147 WDSUB1-004 159235798-159286703 protein_coding
  ENST00000359774 WDSUB1-001 159235793-159286799 protein_coding
  ENST00000392796 WDSUB1-002 159235801-159286552 protein_coding
  ENST00000409124 WDSUB1-003 159235834-159286669 protein_coding
  ENST00000409990 WDSUB1-005 159235801-159286592 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358147ENST00000359774ENST00000392796ENST00000409124ENST00000409990
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358147 N/A 1.113±0.00 1.085±0.00 0.358±0.00 0.985±0.36 0.493±0.07 1.260±0.00 1.618±0.00 N/A N/A 0.686±0.00 3.794±1.88 0.896±0.00 1.303±0.07
ENST00000359774 1.833±0.00 N/A N/A 0.269±0.00 1.548±0.83 2.754±0.00 1.242±0.00 4.142±0.00 0.823±0.13 1.570±0.00 0.237±0.00 3.940±0.96 0.872±0.00 1.964±0.70
ENST00000392796 N/A N/A N/A N/A N/A N/A N/A 0.386±0.00 0.141±0.00 N/A 0.856±0.00 2.456±0.98 1.797±0.40 N/A
ENST00000409124 N/A N/A N/A N/A N/A N/A 0.345±0.00 N/A N/A 0.731±0.00 N/A N/A N/A N/A
ENST00000409990 N/A N/A N/A N/A N/A N/A N/A 2.773±0.00 N/A N/A N/A 2.392±0.00 1.707±0.46 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X8 CIL_0007X8_0001 VISTA 2:158652559-159256392
CIL_0008PS CIL_0008PS_0001 VISTA 2:158729476-159332500
CIL_0008P7 CIL_0008P7_0001 VISTA 2:158911416-159511996
CIL_0005U3 CIL_0005U3_0001 CGP 2:158968634-159286799
CIL_0005U2 CIL_0005U2_0001 CGP 2:159235793-159616692

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0016567 IEA protein ubiquitination
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090418 wdsub1 WD repeat, sterile alpha motif and U-box domain containing 1 protein_coding Danio_rerio
ENSMUSG00000026988 Wdsub1 WD repeat, SAM and U-box domain containing 1 protein_coding Mus_musculus

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