C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA dehydrogenase, short/branched chain
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196177 ACADSB 9606 + 10:123008979-123058311 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358776 ACADSB-001 123009016-123058311 protein_coding
  ENST00000368869 ACADSB-004 123008979-123054119 protein_coding
  ENST00000411816 ACADSB-002 123027534-123040657 protein_coding
  ENST00000496730 ACADSB-003 123034355-123047249 processed_transcript
  ENST00000541070 ACADSB-005 123052761-123053878 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358776ENST00000368869
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358776 1.835±0.00 1.446±0.00 8.815±0.00 3.127±1.57 2.836±1.34 1.778±0.27 6.652±5.43 32.649±27.44 21.512±19.67 0.463±0.04 2.045±0.07 1.246±0.72 0.854±0.06 1.490±0.76
ENST00000368869 N/A N/A N/A N/A N/A 1.453±0.00 N/A N/A 2.008±0.00 1.112±0.00 2.868±0.00 3.584±0.00 1.825±0.00 3.779±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DB CIL_0008DB_0001 VISTA 10:122767938-123370218
CIL_0009A3 CIL_0009A3_0001 VISTA 10:122792297-123393555
CIL_0007QE CIL_0007QE_0001 VISTA 10:122843411-123445122
CIL_00011Q CIL_00011Q_0001 CGP 10:122990806-123058311
CIL_00011R CIL_00011R_0001 CGP 10:123008979-123137741

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003995 EXP:IEA acyl-CoA dehydrogenase activity
GO:0005739 IDA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006631 IEA fatty acid metabolic process
GO:0008152 IEA metabolic process
GO:0009083 TAS branched-chain amino acid catabolic process
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076780 acadsb acyl-CoA dehydrogenase, short/branched chain protein_coding Danio_rerio
ENSMUSG00000030861 Acadsb acyl-Coenzyme A dehydrogenase, short/branched chain protein_coding Mus_musculus

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