C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member F1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196376 SLC35F1 9606 + 6:117907526-118317676 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360388 SLC35F1-001 117907526-118317676 protein_coding
  ENST00000621341 SLC35F1-201 118154442-118317676 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360388ENST00000621341
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360388 0.670±0.00 N/A N/A 5.768±3.60 N/A 0.681±0.59 N/A N/A N/A 0.052±0.00 N/A 0.302±0.00 N/A 0.439±0.00
ENST00000621341 0.240±0.00 0.598±0.00 0.186±0.00 6.784±2.30 0.680±0.39 1.162±0.83 0.910±0.00 0.175±0.15 0.161±0.13 0.087±0.00 0.146±0.11 0.127±0.03 0.045±0.02 0.404±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YT CIL_0007YT_0001 VISTA 6:117651451-118254208
CIL_0005XP CIL_0005XP_0001 CGP 6:117675502-118317676
CIL_0005XE CIL_0005XE_0001 CGP 6:117907526-118710075

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053003 slc35f1 solute carrier family 35, member F1 protein_coding Danio_rerio
ENSMUSG00000038602 Slc35f1 solute carrier family 35, member F1 protein_coding Mus_musculus

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