C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TSC22 domain family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196428 TSC22D2 9606 + 3:150408335-150466431 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361875 TSC22D2-001 150408335-150466431 protein_coding
  ENST00000460316 TSC22D2-008 150456951-150459128 retained_intron
  ENST00000466814 TSC22D2-003 150411009-150460116 protein_coding
  ENST00000480589 TSC22D2-005 150410969-150458861 protein_coding
  ENST00000485421 TSC22D2-004 150411179-150458679 nonsense_mediated_decay
  ENST00000492828 TSC22D2-007 150423039-150423451 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361875ENST00000460316ENST00000466814ENST00000480589ENST00000485421
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361875 N/A 0.774±0.00 1.293±0.00 2.097±0.46 1.114±0.00 0.934±0.00 0.747±0.38 1.297±0.00 0.678±0.27 1.626±0.00 0.555±0.40 0.839±0.06 0.712±0.39 1.649±0.15
ENST00000460316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.669±0.00 N/A N/A N/A
ENST00000466814 5.395±0.00 5.147±0.00 3.027±0.00 2.334±1.10 5.505±0.79 3.628±0.26 2.827±1.99 4.064±1.99 3.118±0.84 4.140±1.28 1.533±0.85 5.962±0.59 3.941±1.74 10.790±2.02
ENST00000480589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.917±0.00 N/A N/A N/A
ENST00000485421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QZ CIL_0002QZ_0001 CGP 3:149964904-150466431
CIL_0002QY CIL_0002QY_0001 CGP 3:150408335-150603228

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006970 IEA response to osmotic stress

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041839 tsc22d2 TSC22 domain family 2 protein_coding Danio_rerio
ENSMUSG00000027806 Tsc22d2 TSC22 domain family, member 2 protein_coding Mus_musculus

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