C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription elongation factor A (SII)-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196507 TCEAL3 9606 + X:103607451-103629690 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000243286 TCEAL3-201 103607906-103609926 protein_coding
  ENST00000372627 TCEAL3-001 103607906-103609927 protein_coding
  ENST00000372628 TCEAL3-002 103607451-103609927 protein_coding
  ENST00000477014 TCEAL3-003 103607971-103629690 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000243286ENST00000372627
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000243286 N/A N/A N/A 17.496±14.54 N/A N/A 5.117±0.00 N/A 1.631±0.00 14.913±0.00 N/A N/A 4.794±0.18 N/A
ENST00000372627 17.486±0.00 29.483±0.00 0.917±0.00 22.929±17.64 5.253±4.32 11.157±10.17 4.479±4.06 23.405±0.00 2.961±0.00 6.537±4.89 3.982±0.00 45.522±31.13 13.300±1.69 33.348±20.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AM CIL_0002AM_0001 CGP X:103607451-103630953

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031409 Tceal6 transcription elongation factor A (SII)-like 6 protein_coding Mus_musculus
ENSMUSG00000044550 Tceal3 transcription elongation factor A (SII)-like 3 protein_coding Mus_musculus
ENSMUSG00000054034 Tceal5 transcription elongation factor A (SII)-like 5 protein_coding Mus_musculus

Loading